STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFT8_GASACKelch domain containing 4. (578 aa)    
Predicted Functional Partners:
G3Q735_GASAC
UTP6 small subunit processome component.
   
    0.733
G3PDL1_GASAC
CCAAT enhancer binding protein zeta.
   
    0.701
G3PGG6_GASAC
RNA binding motif protein 28.
   
    0.596
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
    0.592
G3P9E6_GASAC
Glutamate-rich WD repeat containing 1.
   
    0.592
G3PRJ4_GASAC
BMS1 ribosome biogenesis factor.
   
    0.571
G3NM70_GASAC
WD repeat domain 74.
   
    0.559
G3PQ19_GASAC
PWP2 small subunit processome component.
   
    0.538
G3N7W3_GASAC
Protein MAK16 homolog; Belongs to the MAK16 family.
   
    0.529
G3Q811_GASAC
ESF1, nucleolar pre-rRNA processing protein, homolog (S. cerevisiae).
   
    0.526
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.