STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFV4_GASACHeterogeneous nuclear ribonucleoprotein R. (631 aa)    
Predicted Functional Partners:
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.820
G3NXK6_GASAC
Heterogeneous nuclear ribonucleoprotein K.
   
 0.789
G3PUV4_GASAC
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.789
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.780
HNRNPH3
Heterogeneous nuclear ribonucleoprotein H3.
   
 0.753
G3Q317_GASAC
Heterogeneous nuclear ribonucleoprotein H1.
   
 0.753
G3Q0U4_GASAC
RRM domain-containing protein.
   
 0.747
G3Q573_GASAC
RRM domain-containing protein.
   
 0.747
G3PAP2_GASAC
Uncharacterized protein.
   
 0.746
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.746
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.