STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFV5_GASACPoly(rC) binding protein 2. (318 aa)    
Predicted Functional Partners:
G3NSE6_GASAC
Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...]
    
 0.771
NCBP1
Nuclear cap binding protein subunit 1.
   
 0.764
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.760
G3P7K2_GASAC
Heterogeneous nuclear ribonucleoprotein M.
   
 0.746
G3PYU0_GASAC
RNA binding motif protein X-linked.
   
 0.739
G3Q0U4_GASAC
RRM domain-containing protein.
   
 0.726
G3Q573_GASAC
RRM domain-containing protein.
   
 0.726
TRA2B
Transformer 2 beta homolog.
   
 0.711
G3NRE8_GASAC
Transformer 2 beta homolog.
   
 0.710
G3NUV9_GASAC
Transformer 2 alpha homolog.
   
 0.710
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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