STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFV6_GASACPeripherin 2a (retinal degeneration, slow). (347 aa)    
Predicted Functional Partners:
G3PXK0_GASAC
Retinal outer segment membrane protein 1b.
  
 
0.803
NPY7R
Neuropeptide Y receptor Y7; Belongs to the G-protein coupled receptor 1 family.
   
    0.746
G3P3G3_GASAC
MET proto-oncogene, receptor tyrosine kinase.
    
  0.658
G3P8P8_GASAC
Macrophage stimulating 1 receptor a.
    
  0.658
G3PE85_GASAC
Macrophage stimulating 1 receptor b.
    
  0.658
G3NTS1_GASAC
Somatolactin alpha.
   
    0.648
G3PPP4_GASAC
Uncharacterized protein.
   
    0.648
G3NY14_GASAC
Guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2.
   
  
 0.516
G3N8C7_GASAC
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
    
  0.511
G3P069_GASAC
PDGF_2 domain-containing protein; Belongs to the PDGF/VEGF growth factor family.
    
  0.511
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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