Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NFW7_GASACDnaJ (Hsp40) homolog, subfamily C, member 8. (257 aa)    
Predicted Functional Partners:
G3PR91_GASAC
Splicing factor 3a, subunit 2.
    
 
 0.974
G3PLD5_GASAC
Protein phosphatase 1, regulatory subunit 8b.
   
 
 0.969
G3PCH6_GASAC
Cell division cycle 40 homolog (S. cerevisiae).
     
  0.965
SUGP1
SURP and G-patch domain containing 1.
     
  0.962
G3QAY7_GASAC
HIV-1 Tat specific factor 1.
     
 0.961
G3NR45_GASAC
PRP40 pre-mRNA processing factor 40 homolog A.
   
 
 0.956
TCERG1
Transcription elongation regulator 1.
   
 
  0.954
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
   
   0.921
G3PDS4_GASAC
Splicing factor 3a, subunit 1.
   
   0.911
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
   0.900
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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