STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NFY0_GASACCDC-like kinase 2a. (527 aa)    
Predicted Functional Partners:
G3PW35_GASAC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
   
    0.586
G3NZK7_GASAC
SRSF protein kinase 1a.
   
 
0.556
SRPK3
SRSF protein kinase 3.
    
 
0.549
G3NHW2_GASAC
Si:ch211-220i18.4.
    
 
0.549
G3NI69_GASAC
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 
0.549
G3NXU9_GASAC
SRSF protein kinase 1b.
    
 
0.549
G3PEI4_GASAC
Protein kinase domain-containing protein.
    
 
0.549
G3NWI9_GASAC
Uncharacterized protein.
   
   0.548
G3Q3U9_GASAC
YTH domain-containing protein.
   
 
 0.528
YTHDC2
YTH domain containing 2.
   
 
 0.526
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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