Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NFZ7_GASACSignal peptide, CUB domain, EGF-like 3. (1003 aa)    
Predicted Functional Partners:
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
    
 0.786
G3NK22_GASAC
Translocase of outer mitochondrial membrane 20.
    
 0.786
G3PWN7_GASAC
Iroquois homeobox 3a.
    
 
 0.675
G3PAF2_GASAC
Usher syndrome 1C.
    
 
 0.667
GCC2
GRIP domain-containing protein.
    
 0.658
G3N6I7_GASAC
G protein-coupled receptor 84.
    
 
 0.656
G3PMV3_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 18.
   
 0.653
G3NZ98_GASAC
Matrix metallopeptidase 9.
    
 0.643
G3NTK9_GASAC
ADAM metallopeptidase with thrombospondin type 1 motif, 16.
   
 0.641
G3PAT5_GASAC
Spalt-like transcription factor 4.
      
 0.619
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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