STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NG04_GASACSphingosine-1-phosphate lyase 1. (563 aa)    
Predicted Functional Partners:
G3P7V5_GASAC
Si:ch211-212g7.6.
   
 0.968
G3P9U1_GASAC
acidPPc domain-containing protein.
   
 0.968
G3NLL5_GASAC
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.957
G3NEX2_GASAC
Aldehyde dehydrogenase 5 family, member A1 (succinate-semialdehyde dehydrogenase).
  
 0.948
G3PCD5_GASAC
Sphingosine kinase 2.
   
 0.923
G3PGS0_GASAC
DAGKc domain-containing protein.
  
 0.922
SPHK1
Sphingosine kinase 1.
  
 0.922
ALDH18A1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.917
G3NRI1_GASAC
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.917
G3P5S9_GASAC
Phospholipid phosphatase 2a.
   
 0.905
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.