STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NG43_GASACRegulation of nuclear pre-mRNA domain containing 2a. (1082 aa)    
Predicted Functional Partners:
G3PV24_GASAC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.936
G3PSV1_GASAC
RNA polymerase II associated protein 2.
   
 0.895
G3Q0L5_GASAC
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.894
G3NM07_GASAC
Regulation of nuclear pre-mRNA domain containing 1A.
    
0.854
G3NSN5_GASAC
Regulation of nuclear pre-mRNA domain containing 1B.
    
0.854
G3PDN6_GASAC
5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II.
   
 
 0.851
G3Q6T9_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.842
G3NC28_GASAC
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.841
G3NMH3_GASAC
Transcription elongation factor SPT5.
   
 0.832
G3NLB5_GASAC
Polymerase (RNA) II (DNA directed) polypeptide D.
    
  0.830
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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