Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NG45_GASACDdb1 and cul4 associated factor 6. (931 aa)    
Predicted Functional Partners:
G3PYM2_GASAC
Damage-specific DNA binding protein 1.
    
 0.995
G3PHX3_GASAC
WD repeat domain 21.
     
 0.968
G3PRL7_GASAC
Cullin 4A; Belongs to the cullin family.
   
 0.957
G3PZG9_GASAC
Cullin 4B; Belongs to the cullin family.
   
 0.936
DDA1
DET1 and DDB1 associated 1.
    
 0.922
G3PSH9_GASAC
DET1 and DDB1 associated 1.
    
 0.922
G3PED2_GASAC
Ddb1 and cul4 associated factor 5.
     
0.917
G3NNN2_GASAC
Damage-specific DNA binding protein 2.
    
 0.904
G3P717_GASAC
Transient receptor potential cation channel, subfamily C, member 4 associated protein a.
    
 0.881
G3NVV0_GASAC
Ddb1 and cul4 associated factor 7.
    
 0.872
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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