STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NG50_GASACCircadian associated repressor of transcription a. (327 aa)    
Predicted Functional Partners:
G3Q6L3_GASAC
Period circadian clock 1b.
   
 
 0.534
G3PGM0_GASAC
CLOCK-interacting pacemaker b.
      
 0.468
G3NQ73_GASAC
PAS domain-containing protein.
   
 
 0.464
G3PJQ0_GASAC
Period circadian clock 2.
   
 
 0.464
G3NLG4_GASAC
Zgc:111986.
      
 0.451
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.