STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPDEFUncharacterized protein. (133 aa)    
Predicted Functional Partners:
G3Q356_GASAC
Zgc:194281.
    
   0.650
G3NWF7_GASAC
Runt-related transcription factor.
   
 0.593
G3PD31_GASAC
Runt domain-containing protein.
   
 0.586
G3PFC2_GASAC
Runt-related transcription factor.
    
 0.583
G3PRA9_GASAC
Runt-related transcription factor.
    
 0.583
SRF
Serum response factor.
   
 
 0.566
G3PRX4_GASAC
CBFA2/RUNX1 partner transcriptional co-repressor 3.
   
 0.563
G3NMZ0_GASAC
RUNX1 partner transcriptional co-repressor 1.
    
 0.561
G3NRR8_GASAC
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 0.561
G3Q958_GASAC
MADS-box domain-containing protein.
     
 0.553
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]