Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NG83_GASACSi:ch73-238c9.1. (107 aa)    
Predicted Functional Partners:
G3Q6L2_GASAC
RAD50 interactor 1.
    
 
 0.982
G3PMF9_GASAC
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.939
G3P8E1_GASAC
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.915
G3QC29_GASAC
Zw10 kinetochore protein.
    
 
 0.901
G3PAX7_GASAC
Neuroblastoma amplified sequence.
    
 
 0.842
G3P074_GASAC
Syntaxin 18.
    
 
 0.835
G3PHK9_GASAC
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.832
G3P9W9_GASAC
BAI1-associated protein 2a.
    
   0.831
G3PMZ0_GASAC
BAI1 associated protein 2.
    
   0.831
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
 
 0.813
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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