STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NG83_GASACSi:ch73-238c9.1. (107 aa)    
Predicted Functional Partners:
G3Q6L2_GASAC
RAD50 interactor 1.
    
 
 0.718
G3PMF9_GASAC
Sec1 family domain containing 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.606
G3P8E1_GASAC
Unconventional SNARE in the ER 1 homolog (S. cerevisiae).
    
   0.530
G3QC29_GASAC
Zw10 kinetochore protein.
    
 
 0.527
G3PM15_GASAC
Carbonyl reductase 4.
    
 
 0.490
G3P9W9_GASAC
BAI1-associated protein 2a.
    
   0.480
G3PMZ0_GASAC
BAI1 associated protein 2.
    
   0.480
SEC22B
SEC22 homolog B, vesicle trafficking protein (gene/pseudogene); Belongs to the synaptobrevin family.
    
   0.461
G3PU29_GASAC
SEC22 homolog B, vesicle trafficking protein a; Belongs to the synaptobrevin family.
    
   0.461
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.