Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NG91_GASACT-complex 11, testis-specific-like 1. (504 aa)    
Predicted Functional Partners:
G3Q6C5_GASAC
Tetratricopeptide repeat domain 5.
    
   0.569
G3Q8I4_GASAC
Si:ch211-265o23.1.
      
 0.549
G3NCI0_GASAC
Phosphatase domain containing paladin 1a.
      
 0.534
G3NDF4_GASAC
Ubiquitin carboxyl-terminal hydrolase.
      
 0.468
G3NL19_GASAC
Fibronectin leucine rich transmembrane 3.
      
 0.406
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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