STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGB1_GASACAmino acid transporter. (522 aa)    
Predicted Functional Partners:
G3NSB3_GASAC
Bleomycin hydrolase; Belongs to the peptidase C1 family.
      
 0.542
G3PJP7_GASAC
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
    
 0.532
G3NJX7_GASAC
Hexosyltransferase.
      
 0.530
MED19
Mediator of RNA polymerase II transcription subunit 19; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors.
      
 0.528
G3P9G3_GASAC
Solute carrier family 3 member 1.
  
 
 0.522
G3NFU7_GASAC
Solute carrier family 7 member 5.
  
 
 0.512
G3NDH7_GASAC
Ras homolog family member Q.
    
 0.496
G3PH92_GASAC
Solute carrier family 3 member 2b.
  
 
 0.496
G3PUS8_GASAC
Ras homolog family member H.
    
 0.496
G3Q879_GASAC
Aamy domain-containing protein.
  
 
 0.496
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.