STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGC9_GASACSynaptotagmin-like 5. (754 aa)    
Predicted Functional Partners:
G3PBC3_GASAC
Intersectin 2a.
     
 0.716
G3PUV9_GASAC
Intersectin 2b.
     
 0.716
G3NPQ8_GASAC
Stonin-1; May be involved in the endocytic machinery.
   
 0.698
RIMS2
Regulating synaptic membrane exocytosis 2.
   
 
0.692
G3NZN7_GASAC
RAB3A, member RAS oncogene family, b.
   
 0.633
RAB3A
RAB3A, member RAS oncogene family.
   
 0.633
G3NHD1_GASAC
RAB3B, member RAS oncogene family.
   
 0.628
G3NT84_GASAC
RAB3D, member RAS oncogene family, b.
   
 0.628
G3NW34_GASAC
RAB3C, member RAS oncogene family.
   
 0.628
RAB3D
RAB3D, member RAS oncogene family.
   
 0.628
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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