STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGD7_GASACSarcoglycan, alpha. (412 aa)    
Predicted Functional Partners:
G3P882_GASAC
KTI12 chromatin associated homolog.
     
 0.902
G3PCY2_GASAC
Sarcospan (Kras oncogene-associated gene).
   
 
 0.805
G3NUR5_GASAC
Sarcoglycan, gamma.
   
 0.781
G3QCA4_GASAC
Sarcoglycan, delta (dystrophin-associated glycoprotein).
   
 0.766
SGCZ
Sarcoglycan zeta.
   
 0.740
G3PMC1_GASAC
Sarcoglycan, beta (dystrophin-associated glycoprotein).
   
 0.690
G3NDT0_GASAC
Peptidase S72 domain-containing protein.
    
 0.663
G3NFA8_GASAC
Dystroglycan 1.
    
 0.663
G3Q766_GASAC
Uncharacterized protein.
   
 0.644
DMD
Dystrophin; May play a role in anchoring the cytoskeleton to the plasma membrane.
   
 
 0.587
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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