STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGD9_GASACCaMBD domain-containing protein. (539 aa)    
Predicted Functional Partners:
G3Q1U5_GASAC
Calcium binding protein 4.
   
   0.691
G3Q8U5_GASAC
Uncharacterized protein.
   
   0.654
G3NL99_GASAC
Putative lipoyltransferase 2, mitochondrial; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. Belongs to the LipB family.
     
 0.635
G3PUB3_GASAC
Potassium large conductance calcium-activated channel, subfamily M, beta member 2.
     
 0.632
G3PUC3_GASAC
Si:ch211-38m6.7.
     
 0.629
G3PYB3_GASAC
Uncharacterized protein.
   
   0.596
G3PH48_GASAC
Potassium channel, subfamily V, member 2b; Belongs to the potassium channel family.
   
 
 0.573
G3PND2_GASAC
Recoverin a.
   
   0.566
G3NGG8_GASAC
Guanylate cyclase activator 1B.
   
   0.565
G3NC75_GASAC
Potassium calcium-activated channel subfamily M alpha 1.
     
 0.552
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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