Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
G3NGE1_GASACSynaptotagmin IIa. (408 aa)    
Predicted Functional Partners:
G3NL46_GASAC
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.944
G3PPA3_GASAC
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.944
G3P782_GASAC
Zgc:92912.
   
 0.931
G3QAA3_GASAC
Vesicle-associated membrane protein 2.
   
 0.931
VAMP3
Vesicle associated membrane protein 3.
    
 0.914
G3PJH6_GASAC
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.847
G3P6G4_GASAC
Syntaxin 1A (brain); Belongs to the syntaxin family.
   
 0.841
G3PF90_GASAC
Syntaxin 2b; Belongs to the syntaxin family.
   
 0.841
G3PP93_GASAC
Syntaxin 1B; Belongs to the syntaxin family.
   
 0.841
G3PVN7_GASAC
t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.
   
 0.841
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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