STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGE9_GASACISY1 splicing factor homolog. (281 aa)    
Predicted Functional Partners:
G3NY67_GASAC
BUD31 homolog.
   
 0.999
G3P6H9_GASAC
XPA binding protein 2.
   
 0.999
G3PDK1_GASAC
Crooked neck pre-mRNA splicing factor 1.
   
 0.999
G3Q1K0_GASAC
Pre-mRNA processing factor 19.
    
 0.999
G3NP39_GASAC
SNW domain containing 1.
    
 0.997
G3Q1S0_GASAC
RNA binding motif protein 22.
   
 0.997
G3NWI0_GASAC
SYF2 pre-mRNA-splicing factor.
   
 
 0.996
G3P8D4_GASAC
Aquarius intron-binding spliceosomal factor.
 
  
 0.996
G3P105_GASAC
Pre-mRNA processing factor 8.
    
 
 0.995
G3PCH6_GASAC
Cell division cycle 40 homolog (S. cerevisiae).
    
 
 0.995
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.