STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGF8_GASACTIA1 cytotoxic granule-associated RNA binding protein-like 1. (372 aa)    
Predicted Functional Partners:
G3PU25_GASAC
Cleavage stimulation factor, 3' pre-RNA, subunit 3.
  
 0.870
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.869
G3PIM5_GASAC
Small nuclear ribonucleoprotein polypeptide G.
   
 0.865
G3NU46_GASAC
Small nuclear ribonucleoprotein Sm D2.
   
 0.863
G3PZX4_GASAC
Small nuclear ribonucleoprotein Sm D3.
   
 0.862
G3PTV6_GASAC
FIP1 like 1b (S. cerevisiae).
   
 0.860
G3Q9D2_GASAC
Small nuclear ribonucleoprotein polypeptide F.
   
 0.860
G3NE42_GASAC
Symplekin.
    
 0.849
G3P1Y1_GASAC
Cleavage and polyadenylation specific factor 1.
   
 0.844
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
 0.844
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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