Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGG6_GASACUncharacterized protein. (540 aa)    
Predicted Functional Partners:
G3PFL6_GASAC
RNA binding motif protein 25a.
   
 0.978
G3PJW5_GASAC
RNA binding motif protein 25b.
   
 0.978
G3N6Z3_GASAC
Splicing factor 1.
   
 0.972
G3NR45_GASAC
PRP40 pre-mRNA processing factor 40 homolog A.
   
 0.971
G3P253_GASAC
Splicing factor 3b, subunit 1.
   
 
 0.969
G3PLW5_GASAC
Histone deacetylase complex subunit SAP18; Involved in the tethering of the SIN3 complex to core histone proteins.
   
 0.955
G3PRL5_GASAC
Uncharacterized protein.
   
  0.952
G3PRL9_GASAC
Uncharacterized protein.
   
  0.952
G3P423_GASAC
Serine and arginine rich splicing factor 11.
   
 
 0.931
G3PTF5_GASAC
Uncharacterized protein.
   
 
 0.931
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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