Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NGH5_GASACAtonal bHLH transcription factor 7. (139 aa)    
Predicted Functional Partners:
VSX2
Visual system homeobox 2.
      
 0.846
G3PYQ2_GASAC
POU domain protein.
    
 
 0.769
G3PAV2_GASAC
Kinesin family member 11; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 
 0.683
G3PEN5_GASAC
Visual system homeobox 1 homolog, chx10-like.
      
 0.681
G3P3J1_GASAC
Forkhead box N4.
      
 0.665
G3NST6_GASAC
Hairy-related 12.
    
 
 0.650
G3NS12_GASAC
Uncharacterized protein.
      
 0.636
G3NK92_GASAC
ZPR1 zinc finger.
      
 0.628
G3N6B4_GASAC
Tetraspanin.
      
 0.619
G3QBX7_GASAC
POU domain protein.
    
 
 0.617
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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