STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGI1_GASACSorting nexin 27a. (539 aa)    
Predicted Functional Partners:
G3NKJ2_GASAC
Uncharacterized protein.
    
 
 0.918
G3PUC0_GASAC
VPS26, retromer complex component A.
   
 
 0.911
G3P932_GASAC
VPS26, retromer complex component B.
   
 
 0.764
G3Q9U2_GASAC
Uncharacterized protein.
   
 
 0.764
G3PMC7_GASAC
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.709
G3NLK9_GASAC
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.591
G3NJI7_GASAC
KRIT1 ankyrin repeat containing.
    
 
 0.565
G3QA81_GASAC
FERM domain containing 8.
    
 
 0.565
G3NV82_GASAC
TBC1 domain family, member 5.
    
 
 0.546
G3PD28_GASAC
Early endosome antigen 1.
    
 
 0.529
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (22%) [HD]