Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGI4_GASACAnkyrin repeat and SOCS box containing 11. (264 aa)    
Predicted Functional Partners:
G3NE47_GASAC
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.896
G3PJ15_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.820
CUL5
Cullin 5; Belongs to the cullin family.
    
 0.820
G3PER6_GASAC
Ankyrin repeat and SOCS box containing 6.
  
 
 0.809
ELOB
Elongin B.
    
 0.804
G3PK45_GASAC
Elongin B.
    
 0.804
G3P0S8_GASAC
Hypoxia inducible factor 1 subunit alpha inhibitor.
    
 
 0.763
G3NXK2_GASAC
Ring finger protein 7.
    
 0.697
G3P3J7_GASAC
Neuralized E3 ubiquitin protein ligase 2.
    
 0.688
G3Q4M1_GASAC
Ankyrin repeat domain 46b.
  
 
  0.640
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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