STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGL0_GASACNegative elongation factor complex member B. (593 aa)    
Predicted Functional Partners:
G3N5S6_GASAC
Negative elongation factor complex member C/D.
   
 0.996
G3Q5Y3_GASAC
Negative elongation factor complex member A.
   
 0.996
G3NEU4_GASAC
Negative elongation factor complex member E.
    
 0.995
G3NMH3_GASAC
Transcription elongation factor SPT5.
   
 0.986
POLR2E
RNA polymerase II subunit E.
   
 0.973
G3NC28_GASAC
Polymerase (RNA) II (DNA directed) polypeptide C.
   
 0.970
G3NU38_GASAC
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
   
 0.968
G3NCK6_GASAC
Propionyl-CoA carboxylase subunit alpha.
   
 0.960
G3NRZ8_GASAC
Methylcrotonoyl-CoA carboxylase 1 (alpha).
   
 0.960
G3QA22_GASAC
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.960
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.