Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NGL4_GASACTranslocase of outer mitochondrial membrane 40 homolog (yeast). (340 aa)    
Predicted Functional Partners:
G3PLD1_GASAC
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
   
 0.991
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 0.981
G3PBL6_GASAC
PTEN induced kinase 1.
    
 0.979
G3NAH7_GASAC
Uncharacterized protein.
   
 0.978
TOMM20
Translocase of outer mitochondrial membrane 20.
   
 0.978
G3Q835_GASAC
Translocase of outer mitochondrial membrane 20b.
   
 0.978
G3NKX9_GASAC
Translocase of outer mitochondrial membrane 22 homolog (yeast).
   
 0.976
G3PJN6_GASAC
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.949
G3NDQ6_GASAC
E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.
   
  0.911
atg6
Uncharacterized protein.
    
  0.910
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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