Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXB13Homeobox B13. (320 aa)    
Predicted Functional Partners:
G3NQ36_GASAC
Meis homeobox 2b.
    
 
 0.575
G3P8J3_GASAC
Meis homeobox 2a.
    
 
 0.575
MEIS1
Meis homeobox 1 a.
    
 
 0.575
G3NHL8_GASAC
Zic family member 1 (odd-paired homolog, Drosophila).
    
 
 0.506
LOC100174876
Androgen receptor.
    
 
 0.468
G3Q204_GASAC
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
 
 0.430
G3Q3N7_GASAC
Uncharacterized protein.
    
 
 0.426
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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