G3NGM7_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

G3NGM7_GASAC

Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (216 aa)

Predicted Functional Partners:

G3NGP8_GASAC

0.949

G3QC84_GASAC

0.933

FGFR1

0.931

G3NKX2_GASAC

0.927

G3NI51_GASAC

0.913

G3PS83_GASAC

0.904

G3NG57_GASAC

0.884

G3NFE3_GASAC

0.861

G3Q1P0_GASAC

0.855

G3Q8T2_GASAC

0.842

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc.

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
FGFR1	G3NFE3_GASAC	ENSGACP00000016410	ENSGACP00000004045	Fibroblast growth factor receptor.	Protein kinase domain-containing protein.	0.527
FGFR1	G3NGM7_GASAC	ENSGACP00000016410	ENSGACP00000004483	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.931
FGFR1	G3NI51_GASAC	ENSGACP00000016410	ENSGACP00000005011	Fibroblast growth factor receptor.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.985
FGFR1	G3PS83_GASAC	ENSGACP00000016410	ENSGACP00000020469	Fibroblast growth factor receptor.	Fibroblast growth factor receptor.	0.901
FGFR1	G3Q1P0_GASAC	ENSGACP00000016410	ENSGACP00000023788	Fibroblast growth factor receptor.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.425
FGFR1	G3Q8T2_GASAC	ENSGACP00000016410	ENSGACP00000026296	Fibroblast growth factor receptor.	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	0.970
G3NFE3_GASAC	FGFR1	ENSGACP00000004045	ENSGACP00000016410	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.527
G3NFE3_GASAC	G3NG57_GASAC	ENSGACP00000004045	ENSGACP00000004312	Protein kinase domain-containing protein.	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	0.442
G3NFE3_GASAC	G3NGM7_GASAC	ENSGACP00000004045	ENSGACP00000004483	Protein kinase domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.861
G3NFE3_GASAC	G3NGP8_GASAC	ENSGACP00000004045	ENSGACP00000004504	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.527
G3NFE3_GASAC	G3NI51_GASAC	ENSGACP00000004045	ENSGACP00000005011	Protein kinase domain-containing protein.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.877
G3NFE3_GASAC	G3NKX2_GASAC	ENSGACP00000004045	ENSGACP00000005985	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.527
G3NFE3_GASAC	G3PS83_GASAC	ENSGACP00000004045	ENSGACP00000020469	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.455
G3NFE3_GASAC	G3Q1P0_GASAC	ENSGACP00000004045	ENSGACP00000023788	Protein kinase domain-containing protein.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.932
G3NFE3_GASAC	G3Q8T2_GASAC	ENSGACP00000004045	ENSGACP00000026296	Protein kinase domain-containing protein.	Fibroblast growth factor 23; Belongs to the heparin-binding growth factors family.	0.886
G3NFE3_GASAC	G3QC84_GASAC	ENSGACP00000004045	ENSGACP00000027500	Protein kinase domain-containing protein.	Fibroblast growth factor receptor.	0.527
G3NG57_GASAC	G3NFE3_GASAC	ENSGACP00000004312	ENSGACP00000004045	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Protein kinase domain-containing protein.	0.442
G3NG57_GASAC	G3NGM7_GASAC	ENSGACP00000004312	ENSGACP00000004483	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.884
G3NG57_GASAC	G3NI51_GASAC	ENSGACP00000004312	ENSGACP00000005011	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Fibroblast growth factor; Belongs to the heparin-binding growth factors family.	0.934
G3NG57_GASAC	G3Q1P0_GASAC	ENSGACP00000004312	ENSGACP00000023788	Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands.	Platelet-derived growth factor receptor, beta polypeptide; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily.	0.457