Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGN6_GASACZinc finger and BTB domain containing 10. (550 aa)    
Predicted Functional Partners:
G3P206_GASAC
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.725
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
 0.656
G3N9I3_GASAC
Myb-like, SWIRM and MPN domains 1.
   
  0.618
G3NZC0_GASAC
DNA cross-link repair 1B.
    
 
 0.593
G3NKK9_GASAC
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
    
 
 0.572
G3Q3F1_GASAC
Nuclear apoptosis inducing factor 1.
      
 0.542
SPOP
Speckle type BTB/POZ protein.
   
 0.518
G3NWJ7_GASAC
Speckle type BTB/POZ protein like b.
   
 0.518
G3PPJ9_GASAC
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
   
  0.508
G3NIY0_GASAC
AT rich interactive domain 4A (RBP1-like).
   
 0.502
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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