Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ATE1Arginyl-tRNA--protein transferase 1; Involved in the post-translational conjugation of arginine to the N-terminal aspartate or glutamate of a protein. This arginylation is required for degradation of the protein via the ubiquitin pathway. Belongs to the R-transferase family. (473 aa)    
Predicted Functional Partners:
G3PW97_GASAC
Golgi associated kinase 1B.
      
 0.760
G3Q619_GASAC
Uncharacterized protein.
    
 
 0.740
G3P932_GASAC
VPS26, retromer complex component B.
    
   0.721
G3Q9U2_GASAC
Uncharacterized protein.
    
   0.721
UBR1
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.692
G3PFF8_GASAC
E3 ubiquitin-protein ligase; Ubiquitin ligase protein which is a component of the N-end rule pathway. Recognizes and binds to proteins bearing specific N- terminal residues that are destabilizing according to the N-end rule, leading to their ubiquitination and subsequent degradation.
   
 
 0.692
G3PPW8_GASAC
Eukaryotic translation initiation factor 1B.
      
 0.679
G3NL82_GASAC
Signal peptidase complex subunit 2.
      
 0.673
G3NT04_GASAC
Ubiquitin protein ligase E3 component n-recognin 4.
      
 0.638
G3N6H7_GASAC
Galactose-3-O-sulfotransferase 4.
      
 0.637
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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