STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (527 aa)    
Predicted Functional Partners:
G3NTN9_GASAC
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.805
G3N6X8_GASAC
Nebulin.
   
 0.772
G3NW33_GASAC
Myosin light chain, phosphorylatable, fast skeletal muscle b.
   
 
 0.748
G3NMS3_GASAC
Myosin binding protein Hb.
   
 0.737
G3NTH8_GASAC
Nebulin-related anchoring protein.
   
 0.725
G3Q7G0_GASAC
Myozenin 2a.
   
  
 0.702
G3P0M2_GASAC
Troponin T type 3a (skeletal, fast).
   
 
 0.700
G3N6H3_GASAC
Uncharacterized protein.
   
 
 0.694
G3NJR4_GASAC
Troponin I4b, tandem duplicate 2.
   
 
 0.693
TNNI2
Uncharacterized protein.
   
 
 0.675
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.