Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LMOD3Leiomodin 3. (527 aa)    
Predicted Functional Partners:
G3P1L3_GASAC
Leiomodin 2 (cardiac) a.
     
 
0.900
G3N6X8_GASAC
Nebulin.
   
 0.774
G3NTH8_GASAC
Nebulin-related anchoring protein.
   
 0.723
G3N6H3_GASAC
Uncharacterized protein.
   
 
 0.696
G3PY73_GASAC
Cysteine and glycine-rich protein 3 (cardiac LIM protein).
   
  
 0.683
G3NLE3_GASAC
Acyl-CoA thioesterase 13.
      
 0.658
G3NTN9_GASAC
Myosin, light chain 1, alkali; skeletal, fast.
   
 
 0.657
G3NTV2_GASAC
Troponin T type 1 (skeletal, slow).
   
 
 0.627
G3NZ33_GASAC
Uncharacterized protein.
   
 
 0.627
G3Q0Y1_GASAC
Myozenin 2b.
   
 
 0.582
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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