Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
G3NGP5_GASACTumor protein D52. (227 aa)    
Predicted Functional Partners:
G3PIU2_GASAC
Tpd52 like 1.
    
  0.986
G3P7U2_GASAC
Tpd52 like 2b.
   
   0.975
G3NU22_GASAC
Mal, T cell differentiation protein 2 (gene/pseudogene).
   
 
 0.929
G3PTR5_GASAC
Mitochondrial ribosomal protein S2.
    
   0.866
G3PKG3_GASAC
Cyclin G associated kinase.
     
 0.678
G3PM30_GASAC
Sorting nexin 8a.
     
 0.654
G3PL91_GASAC
Plasmolipin.
    
 
 0.623
G3PR69_GASAC
Nascent polypeptide associated complex subunit alpha.
    
   0.620
G3N5W4_GASAC
SNARE-associated protein Snapin; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO), such as platelet dense granules and melanosomes. In concert with the AP-3 complex, the BLOC-1 complex is required to target membrane protein cargos into vesicles assembled at cell bodies for delivery into neurites and nerve terminals. The BLOC-1 complex, in association with SNARE proteins, is also proposed to be involved in neurite extension. Plays a role in intracellular vesicle trafficking and synaptic vesicle recycling; Belongs to t [...]
   
 
  0.609
G3P054_GASAC
Yip1 interacting factor homolog B (S. cerevisiae).
   
  
 0.562
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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