STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGP7_GASACPeptidylprolyl isomerase. (1211 aa)    
Predicted Functional Partners:
G3PXV3_GASAC
Syntaxin 5A; Belongs to the syntaxin family.
   
 0.952
G3PZ97_GASAC
USO1 vesicle transport factor.
   
 0.872
G3P1N0_GASAC
Golgi SNAP receptor complex member 1.
   
 0.870
G3QB14_GASAC
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 0.869
GORASP2
GRASP55_65 domain-containing protein.
   
 0.797
G3NHB1_GASAC
Uncharacterized protein.
    
 0.791
G3PGK2_GASAC
Golgi reassembly stacking protein 1a.
    
 0.791
G3PHU4_GASAC
GRASP55_65 domain-containing protein.
    
 0.791
G3PSH4_GASAC
Transmembrane p24 trafficking protein 2.
    
  0.730
G3NTF7_GASAC
Dynactin 2 (p50).
     
 0.723
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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