STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGQ8_GASACApolipoprotein Eb. (264 aa)    
Predicted Functional Partners:
G3NRQ2_GASAC
Apolipoprotein A-Ib.
  
 0.908
G3NNS1_GASAC
Sortilin-related receptor, L(DLR class) A repeats containing.
    
 0.882
G3N682_GASAC
Low density lipoprotein receptor-related protein 1Aa.
    
 0.880
G3NXD3_GASAC
Low density lipoprotein receptor-related protein 1Bb.
    
 0.880
G3P3W9_GASAC
Low density lipoprotein receptor-related protein 1Ab.
    
 0.880
G3NGS3_GASAC
Uncharacterized protein.
   
  
 0.839
G3NGM5_GASAC
Uncharacterized protein.
  
0.811
G3NGN5_GASAC
Uncharacterized protein.
  
0.801
G3PW48_GASAC
Uncharacterized protein; Belongs to the synuclein family.
    
 0.789
G3N4P3_GASAC
DUF1943 domain-containing protein.
   
 0.781
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.