Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NGR2_GASACMitochondrial ribosomal protein L53. (108 aa)    
Predicted Functional Partners:
G3NHG6_GASAC
Mitochondrial ribosomal protein L41.
   
 0.952
G3P8K9_GASAC
Mitochondrial ribosomal protein L12.
   
 0.952
G3P6H3_GASAC
Mitochondrial ribosomal protein L47.
   
 0.944
G3NQH0_GASAC
Mitochondrial ribosomal protein L32.
   
  0.941
G3NI87_GASAC
Mitochondrial ribosomal protein L10.
   
 0.939
G3PKT2_GASAC
Mitochondrial ribosomal protein S30.
    
 
 0.933
G3Q4R4_GASAC
Mitochondrial ribosomal protein L42.
   
 0.932
G3PPJ5_GASAC
Mitochondrial ribosomal protein L46.
   
 0.931
G3NFX5_GASAC
Mitochondrial ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family.
   
  0.926
G3N840_GASAC
Mitochondrial ribosomal protein L20; Belongs to the bacterial ribosomal protein bL20 family.
   
  0.925
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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