STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGR4_GASACU2 small nuclear RNA auxiliary factor 1. (239 aa)    
Predicted Functional Partners:
G3P8Z0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.984
G3PNF0_GASAC
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 0.983
SRSF1
Serine and arginine rich splicing factor 1.
   
 0.882
G3PAP2_GASAC
Uncharacterized protein.
   
 0.862
SRSF3
Serine and arginine rich splicing factor 3b.
   
 0.856
G3PPW2_GASAC
RRM domain-containing protein.
   
 0.840
G3NFF6_GASAC
Serine and arginine rich splicing factor 2a.
   
 0.837
G3PXM2_GASAC
Serine and arginine rich splicing factor 9.
   
 0.833
G3N5K7_GASAC
Small nuclear ribonucleoprotein 70 (U1).
   
 0.818
G3QBM3_GASAC
Small nuclear ribonucleoprotein 35 (U11/U12).
   
 0.818
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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