Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGS2_GASACLeucine rich repeat and Ig domain containing 1a. (624 aa)    
Predicted Functional Partners:
G3P560_GASAC
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 0.924
G3PCJ1_GASAC
Reticulon.
    
 0.736
G3PLT6_GASAC
Reticulon 4 receptor.
   
 
 0.711
G3P4X3_GASAC
Reticulon.
    
 0.673
G3N6X1_GASAC
Reticulon.
    
 0.670
G3P0E4_GASAC
Reticulon.
    
 0.670
G3Q983_GASAC
Reticulon.
    
 0.670
G3PFR5_GASAC
Myelin associated glycoprotein.
    
 0.648
G3NA78_GASAC
Uncharacterized protein.
    
 0.557
G3NXF4_GASAC
Uncharacterized protein.
    
 0.557
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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