Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
G3NGS8_GASACSi:dkey-90l8.3. (159 aa)    
Predicted Functional Partners:
G3NBP9_GASAC
CtIP_N domain-containing protein.
    
 
 0.853
G3NWI6_GASAC
LIM domain binding 1a.
   
 0.826
G3PWI4_GASAC
LIM domain binding 2a.
   
 0.826
G3Q2Z2_GASAC
LIM-domain binding 1b.
   
 0.826
G3NAN3_GASAC
Isopentenyl-diphosphate delta isomerase 1.
    
   0.815
G3NRQ7_GASAC
NME/NM23 family member 8; Belongs to the NDK family.
    
   0.731
G3NSY0_GASAC
Uncharacterized protein.
    
 
 0.643
G3NIC0_GASAC
ISL LIM homeobox 1.
    
   0.624
G3P8L8_GASAC
ISL LIM homeobox 2a.
    
   0.624
ISL2
ISL LIM homeobox 2b.
    
   0.624
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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