STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGS9_GASACFamily with sequence similarity 8 member A1a. (309 aa)    
Predicted Functional Partners:
G3PVF0_GASAC
Autocrine motility factor receptor b.
    
 
 0.691
G3Q4E9_GASAC
Synovial apoptosis inhibitor 1, synoviolin.
    
 
 0.691
G3PI80_GASAC
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
    
 
 0.690
G3NMZ2_GASAC
Zmp:0000000662.
    
 
 0.552
G3QAY5_GASAC
Ring finger protein 145b.
    
 
 0.552
G3P4T2_GASAC
Ring finger protein 139.
    
 
 0.539
G3PHI1_GASAC
Checkpoint with forkhead and ring finger domains, E3 ubiquitin protein ligase.
   
   0.525
LNP1
Leukemia NUP98 fusion partner 1.
    
   0.520
G3PBU4_GASAC
Si:dkey-24p1.6.
    
 
 0.510
G3N6J5_GASAC
OS9 endoplasmic reticulum lectin.
    
 
 0.442
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.