Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGT3_GASACAnkyrin repeat domain 10b. (333 aa)    
Predicted Functional Partners:
G3Q4M1_GASAC
Ankyrin repeat domain 46b.
  
 
  0.628
G3PAA7_GASAC
Ankyrin repeat domain 29.
  
   
 0.610
G3NH07_GASAC
RAB20, member RAS oncogene family.
    
 0.608
G3PRE2_GASAC
Cysteinyl-tRNA synthetase 2, mitochondrial.
   
 
 0.599
G3NGZ2_GASAC
Inhibitor of growth protein.
    
 
 0.587
G3PJH0_GASAC
Intraflagellar transport 81 homolog.
    
 0.582
UBE3A
Ubiquitin-protein ligase E3A; E3 ubiquitin-protein ligase which accepts ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and transfers it to its substrates.
    
 
 0.575
G3N915_GASAC
Intraflagellar transport 88 homolog.
   
 0.572
G3NQR2_GASAC
TNF receptor-associated factor 7.
    
 0.569
G3PKN0_GASAC
Ubiquitin protein ligase E3A.
    
 
 0.569
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.