Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGT7_GASACAtaxin 1a. (724 aa)    
Predicted Functional Partners:
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
  0.929
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
  0.919
G3P1S6_GASAC
Ataxin 1b.
  
  
 
0.907
G3PQQ7_GASAC
AXH domain-containing protein.
     
 
0.900
G3NB79_GASAC
Uncharacterized protein.
    
 
 0.878
G3P4F6_GASAC
Capicua transcriptional repressor b.
    
 
 0.878
G3NSL2_GASAC
Ataxin 2.
   
 
 0.691
G3Q605_GASAC
Kruppel-like factor 1 (erythroid).
    
 
 0.659
G3Q648_GASAC
RNA binding motif protein 17.
    
 
 0.655
G3NPB4_GASAC
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1; Belongs to the 14-3-3 family.
    
 
 0.640
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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