STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGT7_GASACAtaxin 1a. (724 aa)    
Predicted Functional Partners:
G3PTN1_GASAC
Recombination signal binding protein for immunoglobulin kappa J region a.
    
 0.883
G3N415_GASAC
LAG1_DNAbind domain-containing protein.
    
 0.878
G3NB79_GASAC
Uncharacterized protein.
    
 
 0.834
G3P4F6_GASAC
Capicua transcriptional repressor b.
    
 
 0.834
G3PS32_GASAC
IST1 factor associated with ESCRT-III.
    
 0.707
G3Q9K6_GASAC
BBX high mobility group box domain containing.
    
 
 0.638
G3NQE2_GASAC
Pumilio RNA-binding family member 1.
     
 0.630
G3P589_GASAC
Pumilio RNA-binding family member 2.
     
 0.630
G3NR96_GASAC
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.609
G3P619_GASAC
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.609
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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