LSM3 protein (Gasterosteus aculeatus) - STRING interaction network

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[Homology]

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LSM3

U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (102 aa)

Predicted Functional Partners:

G3NI70_GASAC

0.999

LSM5

0.999

LSM4

0.999

G3P804_GASAC

0.999

G3PA33_GASAC

0.999

LSM1

0.999

G3PYQ5_GASAC

0.999

SNRPD1

0.997

G3PIM5_GASAC

0.997

G3PZX4_GASAC

0.997

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NI70_GASAC	G3P804_GASAC	ENSGACP00000005030	ENSGACP00000013728	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
G3NI70_GASAC	G3PA33_GASAC	ENSGACP00000005030	ENSGACP00000014457	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.999
G3NI70_GASAC	G3PIM5_GASAC	ENSGACP00000005030	ENSGACP00000017453	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein polypeptide G.	0.991
G3NI70_GASAC	G3PYQ5_GASAC	ENSGACP00000005030	ENSGACP00000022745	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
G3NI70_GASAC	G3PZX4_GASAC	ENSGACP00000005030	ENSGACP00000023164	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D3.	0.984
G3NI70_GASAC	LSM1	ENSGACP00000005030	ENSGACP00000015561	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
G3NI70_GASAC	LSM3	ENSGACP00000005030	ENSGACP00000004564	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3NI70_GASAC	LSM4	ENSGACP00000005030	ENSGACP00000010798	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3NI70_GASAC	LSM5	ENSGACP00000005030	ENSGACP00000007320	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
G3NI70_GASAC	SNRPD1	ENSGACP00000005030	ENSGACP00000006899	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.987
G3P804_GASAC	G3NI70_GASAC	ENSGACP00000013728	ENSGACP00000005030	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3P804_GASAC	G3PA33_GASAC	ENSGACP00000013728	ENSGACP00000014457	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.	0.996
G3P804_GASAC	G3PIM5_GASAC	ENSGACP00000013728	ENSGACP00000017453	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein polypeptide G.	0.986
G3P804_GASAC	G3PYQ5_GASAC	ENSGACP00000013728	ENSGACP00000022745	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
G3P804_GASAC	G3PZX4_GASAC	ENSGACP00000013728	ENSGACP00000023164	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein Sm D3.	0.998
G3P804_GASAC	LSM1	ENSGACP00000013728	ENSGACP00000015561	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
G3P804_GASAC	LSM3	ENSGACP00000013728	ENSGACP00000004564	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3P804_GASAC	LSM4	ENSGACP00000013728	ENSGACP00000010798	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
G3P804_GASAC	LSM5	ENSGACP00000013728	ENSGACP00000007320	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
G3P804_GASAC	SNRPD1	ENSGACP00000013728	ENSGACP00000006899	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family.	0.991

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