Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGW6_GASACCadherin-related 23. (3371 aa)    
Predicted Functional Partners:
G3PAF2_GASAC
Usher syndrome 1C.
   
 
 0.989
G3NUM1_GASAC
Protocadherin-related 15b.
   
 0.933
G3P387_GASAC
Protocadherin-related 15a.
   
 0.933
G3P391_GASAC
Si:dkeyp-86d6.2.
   
 0.933
G3P2E0_GASAC
Uncharacterized protein.
   
 0.927
G3PYT2_GASAC
CA domain-containing protein.
   
 0.927
G3PC90_GASAC
Transmembrane channel-like protein.
    
 0.860
G3Q1L6_GASAC
Catenin (cadherin-associated protein), alpha 2.
   
 0.779
G3Q378_GASAC
Catenin (cadherin-associated protein), alpha 1.
   
 0.779
G3P8K5_GASAC
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
      
 0.752
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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