Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NGY2_GASACTwinkle mtDNA helicase. (609 aa)    
Predicted Functional Partners:
G3PCJ9_GASAC
Polymerase (DNA directed), gamma.
   
 
 0.969
G3P6U3_GASAC
Coproporphyrinogen oxidase.
    
   0.925
G3PHQ7_GASAC
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 
 0.918
G3Q9G8_GASAC
Single-stranded DNA binding protein 1.
   
 
 0.910
G3PPH8_GASAC
Prostaglandin E synthase 2-like.
    
   0.880
G3PRW8_GASAC
Transcription factor A, mitochondrial.
     
 0.871
G3NC63_GASAC
Nucleotide binding protein-like.
    
 
 0.860
NUBPL
Uncharacterized protein.
    
 
 0.860
G3P906_GASAC
Endonuclease.
    
 
 0.842
G3P3A4_GASAC
Armadillo repeat containing 8.
    
   0.822
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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