STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NGY2_GASACTwinkle mtDNA helicase. (609 aa)    
Predicted Functional Partners:
G3PCJ9_GASAC
Polymerase (DNA directed), gamma.
   
 
 0.885
G3N8A7_GASAC
Helicase, POLQ like.
   
 
 0.847
G3PUF7_GASAC
Polymerase (DNA directed), theta.
   
 
 0.847
G3Q5Y7_GASAC
POLAc domain-containing protein.
   
 
 0.847
G3Q9G8_GASAC
Single-stranded DNA binding protein 1.
   
  
 0.608
G3PHQ7_GASAC
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
  
 0.594
G3PRW8_GASAC
Transcription factor A, mitochondrial.
   
  
 0.584
G3P6U3_GASAC
Coproporphyrinogen oxidase.
    
   0.556
G3NGQ9_GASAC
GA binding protein transcription factor subunit alpha.
     
 0.555
MGME1
Mitochondrial genome maintenance exonuclease 1; Metal-dependent single-stranded DNA (ssDNA) exonuclease involved in mitochondrial genome maintenance. Has preference for 5'-3' exonuclease activity. Necessary for maintenance of proper 7S DNA levels. Probably involved in mitochondrial DNA (mtDNA) repair. Belongs to the MGME1 family.
   
  
 0.525
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.