Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PDZD7PDZ domain containing 7. (471 aa)    
Predicted Functional Partners:
G3P8K5_GASAC
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.734
G3PAF2_GASAC
Usher syndrome 1C.
     
0.711
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.689
G3PL93_GASAC
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.689
G3PQH8_GASAC
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.689
G3N915_GASAC
Intraflagellar transport 88 homolog.
    
 0.674
G3NC32_GASAC
TNF receptor-associated factor 3 interacting protein 1.
    
 0.663
G3PJG1_GASAC
Si:ch211-57i17.5.
    
 
 0.663
G3PTB5_GASAC
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.658
FCHSD2
FCH and double SH3 domains 2.
    
   0.647
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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