Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NH08_GASACChorein_N domain-containing protein. (420 aa)    
Predicted Functional Partners:
G3NH14_GASAC
Uncharacterized protein.
 
     0.944
G3NH17_GASAC
Uncharacterized protein.
 
     0.920
G3PWZ4_GASAC
AAA domain-containing protein.
    
   0.676
G3NMM2_GASAC
Neurofibromin 1b.
   
   0.626
G3NC49_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
 0.621
G3PMC7_GASAC
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.610
G3NSA3_GASAC
DnaJ heat shock protein family (Hsp40) member C7.
    
   0.572
G3P1Z3_GASAC
DnaJ (Hsp40) homolog, subfamily C, member 7.
    
   0.572
G3QBE0_GASAC
Synaptojanin 1.
   
 
 0.553
G3QC79_GASAC
Phosphoglycerate kinase.
      
 0.550
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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