Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NH30_GASACCollagen IV NC1 domain-containing protein. (1677 aa)    
Predicted Functional Partners:
G3NZ70_GASAC
Integrin, alpha 11b; Belongs to the integrin alpha chain family.
    
 0.794
G3PXP8_GASAC
Integrin, alpha 11a; Belongs to the integrin alpha chain family.
    
 0.794
G3NTA4_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.790
G3P2T3_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.790
G3NL26_GASAC
Integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor), tandem duplicate 2; Belongs to the integrin alpha chain family.
    
 0.787
G3PDG3_GASAC
Integrin, alpha 10; Belongs to the integrin alpha chain family.
    
 0.787
G3PUX7_GASAC
Integrin, alpha 1; Belongs to the integrin alpha chain family.
    
 0.787
G3NA85_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.778
G3N9V8_GASAC
Integrin beta; Belongs to the integrin beta chain family.
    
 0.777
G3NMX5_GASAC
Integrin beta.
    
 0.774
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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