STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3NH32_GASACPleckstrin homology domain containing, family M (with RUN domain) member 1. (1077 aa)    
Predicted Functional Partners:
G3Q9W3_GASAC
UV radiation resistance associated gene.
    
 0.917
G3Q833_GASAC
Microtubule-associated protein 1 light chain 3 gamma.
    
 
 0.889
G3Q5X0_GASAC
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.692
G3NP54_GASAC
VPS39 subunit of HOPS complex.
   
 
 0.688
atg6
Uncharacterized protein.
    
 
 0.640
G3Q9K7_GASAC
Vacuolar protein sorting-associated protein 11 homolog; Plays a role in vesicle-mediated protein trafficking to lysosomal compartments including the endocytic membrane transport and autophagic pathways. Believed to act as a core component of the putative HOPS and CORVET endosomal tethering complexes. Belongs to the VPS11 family.
    
 
 0.639
G3PHS2_GASAC
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.615
G3N6W8_GASAC
Uncharacterized protein.
    
 
 0.587
G3P576_GASAC
RAB7a, member RAS oncogene family.
    
 
 0.587
G3PUI6_GASAC
RUN and FYVE domain containing 2.
     
 0.543
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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