Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
G3NH52_GASACDeoxyribonuclease 1 like 4, tandem duplicate 1. (335 aa)    
Predicted Functional Partners:
G3N5B5_GASAC
Inhibitor of nuclear factor kappa B kinase subunit epsilon.
   
 0.897
G3N659_GASAC
TANK-binding kinase 1.
   
 0.897
G3NK41_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.773
G3NNR0_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.773
G3PTC4_GASAC
TNF receptor-associated factor.
    
 0.773
G3PWU5_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.773
TRAF5
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.773
G3PYF8_GASAC
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.733
G3NYV6_GASAC
Interferon regulatory factor 3.
    
 0.693
G3PBQ7_GASAC
Interferon regulatory factor 7.
    
 0.685
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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